Best E-Invoicing Software for SMEs Malaysia 2026
Small and medium enterprises — automation and scale
Budget: RM80–RM300/monthMalaysian SMEs need software that grows with them. Key needs: automation to handle 50–500 invoices/month, integration with POS or ERP, multi-branch support.
Top Picks for SME Businesses
Hand-selected vendors that best match the needs of sme businesses in Malaysia.
SQL Accounting
SaaS
RM80/mo
On grant panelPeppol Ready
AutoCount
On-premise
RM120/mo
On grant panelPeppol Ready
Zoho Books
SaaS
RM100/mo
Deskera
SaaS
RM199/mo
Peppol Ready
What SME Businesses Need from E-Invoicing Software
✓High-volume invoice automation
✓Multi-user and multi-branch
✓API or ERP integration
✓Consolidated invoice support
✓Implementation assistance
All LHDN-Certified Vendors — Sorted by Price
Full list of certified vendors available to sme businesses in Malaysia.
| Vendor | Type | From (RM/mo) | Grant | MDEC Peppol | |
|---|---|---|---|---|---|
| Finexus AREMA | Standalone E-Invoicing | RM0 | ✓ | ✓ | View → |
| Million Accounting | On-premise | RM42 | ✓ | — | View → |
| Bukku | SaaS | RM50 | ✓ | ✓ | View → |
| QNE Accounting | SaaS | RM62 | ✓ | ✓ | View → |
| SQL Accounting | SaaS | RM80 | ✓ | ✓ | View → |
| Info-Tech | On-premise | RM90 | — | ✓ | View → |
| AutoCount | On-premise | RM120 | ✓ | ✓ | View → |
| Xero | SaaS | RM150 | — | ✓ | View → |
| Deskera | SaaS | RM199 | — | ✓ | View → |
| Sage | Hybrid | RM250 | — | ✓ | View → |
| Accenture Solutions Sdn Bhd | — | POA | — | ✓ | View → |
| Activants Pte Ltd | — | POA | — | ✓ | View → |
| Ademico Software | — | POA | — | ✓ | View → |
| Advintek Consulting Services Sdn. Bhd | — | POA | — | ✓ | View → |
| Adynamics Solutions Sdn. Bhd | — | POA | — | ✓ | View → |
| Agmo Studio Sdn Bhd | — | POA | ✓ | — | View → |
| AISoftBox Sdn Bhd | — | POA | ✓ | — | View → |
| ALPHA DIGITAL (M) SDN BHD | — | POA | ✓ | — | View → |
| Aplus Software Sdn Bhd | — | POA | ✓ | — | View → |
| Appfuxion Consulting Sdn. Bhd. | — | POA | — | ✓ | View → |
| Authentic Venture Sdn Bhd | — | POA | ✓ | — | View → |
| Avalara Europe Limited | — | POA | — | ✓ | View → |
| Awantec Systems Sdn Bhd | — | POA | — | ✓ | View → |
| B-Global Sdn. Bhd | — | POA | — | ✓ | View → |
| B2BE Malaysia Sdn Bhd | — | POA | — | ✓ | View → |
| B2BROUTER GLOBAL SL | — | POA | — | ✓ | View → |
| Basware Corporation | — | POA | — | ✓ | View → |
| Beacon Systems Sdn Bhd | — | POA | — | ✓ | View → |
| Bean Search Expert Sdn Bhd | — | POA | ✓ | — | View → |
| Bigledger Sdn Bhd | — | POA | — | ✓ | View → |
| Billit BV | — | POA | — | ✓ | View → |
| BLAZE TECH SDN BHD | — | POA | ✓ | — | View → |
| Bluevy Cloud Sdn Bhd | — | POA | ✓ | — | View → |
| Boss Ok Sdn Bhd | — | POA | ✓ | — | View → |
| C Y MULTITRADE SDN BHD | — | POA | ✓ | — | View → |
| Century Software (M) Sdn Bhd | — | POA | — | ✓ | View → |
| Comarch S.A. | — | POA | — | ✓ | View → |
| Complyance, Inc. | — | POA | — | ✓ | View → |
| CRACKTECH SDN BHD | — | POA | ✓ | — | View → |
| Crediflow AB | — | POA | — | ✓ | View → |
| CRT Insights Technologies Sdn Bhd | — | POA | — | ✓ | View → |
| CTE Computer Centre Sdn Bhd | — | POA | ✓ | — | View → |
| CTH Commerce Sdn Bhd | — | POA | ✓ | — | View → |
| Cube Global Sdn. Bhd. | — | POA | ✓ | — | View → |
| Cuscapi Innovation Lab Sdn Bhd | — | POA | ✓ | — | View → |
| Cygnet Infotech Private Limited | — | POA | — | ✓ | View → |
| Datapost Pte Ltd | — | POA | — | ✓ | View → |
| Deepsky Sdn Bhd | — | POA | ✓ | — | View → |
| Digital Technologies Società Benefit S.r.l. | — | POA | — | ✓ | View → |
| DINESOFT SDN BHD | — | POA | ✓ | — | View → |
| Dizcovery Asia Sdn Bhd | — | POA | ✓ | — | View → |
| E-Global SCM Solutions Sdn Bhd | — | POA | ✓ | — | View → |
| EBI Software Sdn Bhd | — | POA | ✓ | ✓ | View → |
| Edicom Capital Sociedad Limitada | — | POA | — | ✓ | View → |
| Egroup Tech Sdn Bhd | — | POA | ✓ | ✓ | View → |
| EIGHTY ONE SDN BHD | — | POA | ✓ | — | View → |
| Esker SA | — | POA | — | ✓ | View → |
| Eurosolve Business Intelligence Sdn. Bhd. | — | POA | ✓ | — | View → |
| Fast Track SBOi Sdn Bhd | — | POA | — | ✓ | View → |
| FIRE POS SDN BHD | — | POA | ✓ | — | View → |
| Flick Network | Standalone E-Invoicing | POA | — | ✓ | View → |
| Focus Software Sdn Bhd | — | POA | — | ✓ | View → |
| Fynamics Techno Solutions Private Limited | — | POA | — | ✓ | View → |
| Genesis Cloudbuilder Sdn Bhd | — | POA | — | ✓ | View → |
| Gold-Cheers Holding (M) Sdn. Bhd. | — | POA | ✓ | ✓ | View → |
| Goldsoft Sdn Bhd | — | POA | — | ✓ | View → |
| GoNetPay Sdn Bhd | — | POA | ✓ | — | View → |
| GREENSTEM BUSINESS SOFTWARE SDN BHD | — | POA | ✓ | — | View → |
| IBM Corporation | — | POA | — | ✓ | View → |
| IDCP Systems Sdn Bhd | — | POA | — | ✓ | View → |
| IDEO SOFT SDN BHD | — | POA | ✓ | — | View → |
| IMOCHA Sdn Bhd | — | POA | — | ✓ | View → |
| Infinite Sp. z o.o. | — | POA | — | ✓ | View → |
| INFINITEPAY SDN. BHD. | — | POA | ✓ | — | View → |
| INFOARCH SDN BHD | — | POA | — | ✓ | View → |
| Innosys Pte Ltd | — | POA | — | ✓ | View → |
| IRS SOFTWARE SOLUTION (M SDN BHD | — | POA | ✓ | — | View → |
| JSB Solutions Sdn Bhd | — | POA | ✓ | — | View → |
| Jsoft Solution Sdn Bhd | — | POA | ✓ | ✓ | View → |
| Lenora soft Technologies Private Limited | — | POA | — | ✓ | View → |
| LINK4 PTE. LTD. | — | POA | — | ✓ | View → |
| LVBS TECHNOLOGY SDN BHD | — | POA | ✓ | — | View → |
| Lyndung Sdn. Bhd. | — | POA | ✓ | — | View → |
| ManageTradeX Sdn Bhd | — | POA | — | ✓ | View → |
| Masteritec Sdn Bhd | — | POA | — | ✓ | View → |
| MAXWELL CLOUD TECHNOLOGY SDN BHD | — | POA | — | ✓ | View → |
| MAXWELL CLOUD TECHNOLOGY SDN BHD | — | POA | ✓ | — | View → |
| MELASOFT GmbH | — | POA | — | ✓ | View → |
| MobilityOne Sdn Bhd | — | POA | ✓ | — | View → |
| MODULEIGHT TECHNOLOGIES SDN BHD | — | POA | ✓ | — | View → |
| Monitor ERP System Sdn Bhd | — | POA | — | ✓ | View → |
| MSP Hitect (M) Sdn Bhd | — | POA | — | ✓ | View → |
| MY AONE LEARNING SDN BHD | — | POA | ✓ | — | View → |
| My Software Solutions Sdn Bhd | — | POA | ✓ | — | View → |
| Mybiz Solutions Sdn Bhd | — | POA | — | ✓ | View → |
| MySoft Coporation Sdn Bhd | — | POA | — | ✓ | View → |
| OBM SOFTWARE SDN BHD | — | POA | ✓ | — | View → |
| Ofcom Solution Sdn. Bhd. | — | POA | ✓ | — | View → |
| Open Text Inc | — | POA | — | ✓ | View → |
| Ozedi Holdings Pty Ltd | — | POA | — | ✓ | View → |
| Pagero AB | — | POA | — | ✓ | View → |
| Panda Software House Sdn Bhd. | — | POA | — | ✓ | View → |
| Perennial Systems Pte. Ltd. | — | POA | — | ✓ | View → |
| PPS TECHNOLOGIES SDN BHD | — | POA | ✓ | — | View → |
| Precomp (M) Sdn Bhd | — | POA | — | ✓ | View → |
| PRESOFT (M) SDN BHD | — | POA | ✓ | — | View → |
| PROMPTPAY SOLUTION SDN BHD | — | POA | ✓ | — | View → |
| Radiant Globaltech Berhad | — | POA | — | ✓ | View → |
| ROCKBELL SOFTWARE SDN BHD | — | POA | ✓ | — | View → |
| RTC Teknoloji Anonim Sirketi | — | POA | — | ✓ | View → |
| Scrubtech Sdn Bhd | — | POA | ✓ | — | View → |
| Search and Easy Sdn Bhd | — | POA | ✓ | — | View → |
| SEEBURGER AG | — | POA | — | ✓ | View → |
| SESAMi (Singapore) Pte Ltd | — | POA | — | ✓ | View → |
| SF Asia Solutions Sdn Bhd | — | POA | ✓ | ✓ | View → |
| SHARE COMMERCE SDN BHD | — | POA | ✓ | — | View → |
| Simplicity Consulting Sdn Bhd | — | POA | ✓ | — | View → |
| SIMPLR SOLUTIONS SDN. BHD | — | POA | — | ✓ | View → |
| Skill Quotient Technologies Sdn.Bhd. | — | POA | — | ✓ | View → |
| Smart-Acc Solutions Sdn Bhd | — | POA | ✓ | ✓ | View → |
| SNI Teknoloji Hizmetleri Anonim Şirketi | — | POA | — | ✓ | View → |
| Squincy Sdn Bhd | — | POA | ✓ | — | View → |
| Starvision Information Technology Sdn Bhd | — | POA | — | ✓ | View → |
| Storecove | — | POA | — | ✓ | View → |
| Strella Consulting Sdn Bhd | — | POA | ✓ | — | View → |
| Suma Technoloqy Services LLP | — | POA | — | ✓ | View → |
| Sweetmag Digital (M) Sdn Bhd | — | POA | ✓ | — | View → |
| SYNERGY SOFTWARE SOLUTIONS SDN BHD | — | POA | ✓ | — | View → |
| SYNTAX TECHNOLOGIES SDN BHD | — | POA | ✓ | — | View → |
| Taxilla Inc | — | POA | — | ✓ | View → |
| Tickstar from Xero | — | POA | — | ✓ | View → |
| Total eBiz Solutions Ptd Ltd | — | POA | — | ✓ | View → |
| Valta Technology Group Pty Ltd | — | POA | — | ✓ | View → |
| VATit Processing (Pty) Limited | — | POA | — | ✓ | View → |
| vnetwork System Sdn Bhd | — | POA | ✓ | — | View → |
| Webby Sdn Bhd | — | POA | ✓ | — | View → |
| Wemabox Solutions Sdn Bhd | — | POA | ✓ | — | View → |
| Wezmart Techlab Sdn. Bhd. | — | POA | ✓ | — | View → |
| XEERSOFT SDN BHD | — | POA | ✓ | — | View → |
| XHEALTH INTERNATIONAL SDN BHD | — | POA | ✓ | — | View → |
| Xtractify Sdn Bhd | — | POA | ✓ | — | View → |
| SAP Business One | Hybrid | RM1500 | — | ✓ | View → |
SME E-Invoicing FAQ
What counts as an SME for LHDN e-invoicing phases?
LHDN's phased rollout is based on annual turnover rather than the SME Corp definition. Businesses with turnover between RM25 million and RM100 million were in Phase 2 (January 2025), while those below RM25 million fall into Phase 3 (July 2025) or Phase 4 (January 2026). Check your revenue bracket against LHDN's published schedule to confirm your compliance deadline.
Can SMEs use consolidated e-invoices for retail transactions?
Yes. LHDN permits SMEs in retail or B2C-heavy businesses to issue consolidated e-invoices that aggregate multiple smaller transactions over a day or defined period. This significantly reduces the administrative burden for high-volume retail SMEs who would otherwise need to generate individual e-invoices for every customer sale.
Which e-invoicing software is best for an SME with multiple branches?
SQL Accounting and AutoCount are popular choices for Malaysian SMEs with multiple branches due to their strong local support networks and multi-location features. Cloud-based solutions like Zoho Books and Deskera offer centralised dashboards where all branches can be managed under a single subscription, providing real-time visibility across your entire business.
How do SMEs handle 50–500 e-invoices per month efficiently?
At this volume, manual submission via the free LHDN portal becomes impractical. SMEs at this scale need software with batch invoicing, API integration, and workflow automation. Deskera and Zoho Books both support automated invoice generation from order management or ERP data, which can process hundreds of invoices with minimal manual intervention.
Find the Right Solution for Your SME Business
Use our free readiness calculator to get matched with vendors suited to your business size and budget, or browse the full vendor directory.
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